PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN28566.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family B3
Protein Properties Length: 332aa    MW: 37400.9 Da    PI: 7.0262
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN28566.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.71e-18144241195
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                 f+k+l++sdv++++r++lpkk ae++   ++++e++ +++ d +g  +W++k+++  +++s++yvl+ ++ +Fv+ +gL+ gD+++ +  ++ ++ ++v
  KHN28566.1 144 FQKELKNSDVSSLRRMILPKKAAEAFlpALESKEGIVISMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNTHGLRFGDSIMVY--QDsENNNYV 239
                 99**************************77777999*********9*******9989999999***9.******************99..443666666 PP

                 EE CS
          B3  94 vk 95 
                 ++
  KHN28566.1 240 IQ 241
                 65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.6E-26136248IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.61E-21142241IPR015300DNA-binding pseudobarrel domain
CDDcd100173.32E-24142244No hitNo description
PROSITE profilePS508639.911144246IPR003340B3 DNA binding domain
PfamPF023621.7E-15144242IPR003340B3 DNA binding domain
SMARTSM010199.2E-20144246IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MMMDQRQREK LLHKTEACAF VAGVVPELSL VTVPGNNTNN VNNNNNVVSH SQSNGSGRIQ  60
ENNHHLGLVA AVTSAFGTVQ RKKRMARQRR STKPTSLMNH LNNHKHNKPR SLPSPSASSS  120
YVPLSSATLQ PAREIDQRRL RFLFQKELKN SDVSSLRRMI LPKKAAEAFL PALESKEGIV  180
ISMDDIDGLH VWSFKYRFWP NNNSRMYVLE NTGDFVNTHG LRFGDSIMVY QDSENNNYVI  240
QAKKASDQDE FMEETSDTIN DIFLNDYEVN KPGCFNVTNP AVNDTGMSFI YETTFSNDSP  300
LDFLGGSMTN FSRIGPVETF GSVENLSLDD FY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003553973.10.0PREDICTED: B3 domain-containing transcription factor FUS3-like
SwissprotQ9LW313e-89FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A0B2R3630.0A0A0B2R363_GLYSO; B3 domain-containing transcription factor FUS3
TrEMBLK7MXL60.0K7MXL6_SOYBN; Uncharacterized protein
STRINGGLYMA19G27336.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98582838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-85B3 family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]